summaryrefslogtreecommitdiffstats
path: root/glucometerutils/drivers/fsoptium.py
blob: 92ee76db19fcf2718ad2857de42693b34474c9ce (plain) (blame)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
# -*- coding: utf-8 -*-
"""Driver for FreeStyle Optium devices.

Further information on the device protocol can be found at

https://flameeyes.github.io/glucometer-protocols/abbott/freestyle-optium
"""

__author__ = 'Diego Elio Pettenò'
__email__ = 'flameeyes@flameeyes.eu'
__copyright__ = 'Copyright © 2016-2017, Diego Elio Pettenò'
__license__ = 'MIT'

import datetime
import re
import sys

import serial

from glucometerutils import common
from glucometerutils import exceptions


_CLOCK_RE = re.compile(
  r'^Clock:\t(?P<month>[A-Z][a-z]{2})  (?P<day>[0-9]{2}) (?P<year>[0-9]{4})\t'
  r'(?P<time>[0-9]{2}:[0-9]{2}:[0-9]{2})$')

# The reading can be HI (padded to three-characters by a space) if the value was
# over what the meter was supposed to read. Unlike the "Clock:" line, the months
# of June and July are written in full, everything else is truncated to three
# characters, so accept a space or 'e'/'y' at the end of the month name. Also,
# the time does *not* include seconds.
_READING_RE = re.compile(
  r'^(?P<reading>HI |[0-9]{3})  (?P<month>[A-Z][a-z]{2})[ ey] (?P<day>[0-9]{2}) '
  r'(?P<year>[0-9]{4}) (?P<time>[0-9]{2}:[0-9]{2}) (?P<type>[GK]) 0x00$')

_CHECKSUM_RE = re.compile(
  r'^(?P<checksum>0x[0-9A-F]{4})  END$')

# There are two date format used by the device. One uses three-letters month
# names, and that's easy enough. The other uses three-letters month names,
# except for (at least) July. So ignore the fourth character.
# explicit mapping. Note that the mapping *requires* a trailing whitespace.
_MONTH_MATCHES = {
  'Jan': 1,
  'Feb': 2,
  'Mar': 3,
  'Apr': 4,
  'May': 5,
  'Jun': 6,
  'Jul': 7,
  'Aug': 8,
  'Sep': 9,
  'Oct': 10,
  'Nov': 11,
  'Dec': 12
}


def _parse_clock(datestr):
  """Convert the date/time string used by the the device into a datetime.

  Args:
    datestr: a string as returned by the device during information handling.
  """
  match = _CLOCK_RE.match(datestr)
  if not match:
    raise exceptions.InvalidResponse(datestr)

  # int() parses numbers in decimal, so we don't have to worry about '08'
  day = int(match.group('day'))
  month = _MONTH_MATCHES[match.group('month')]
  year = int(match.group('year'))

  hour, minute, second = map(match.group('time').split(':'), int)

  return datetime.datetime(year, month, day, hour, minute, second)


class Device(object):
  def __init__(self, device):
    if not device:
      raise exceptions.CommandLineError(
        '--device parameter is required, should point to the serial device '
        'connected to the meter.')

    self.serial_ = serial.Serial(
      port=device, baudrate=19200, bytesize=serial.EIGHTBITS,
      parity=serial.PARITY_NONE, stopbits=serial.STOPBITS_ONE,
      timeout=1, xonxoff=True, rtscts=False, dsrdtr=False, writeTimeout=None)

  def _send_command(self, command):
    cmd_bytes = bytes('$%s\r\n' % command, 'ascii')
    self.serial_.write(cmd_bytes)
    self.serial_.flush()

    response = self.serial_.readlines()

    # We always want to decode the output, and remove stray \r\n. Any failure in
    # decoding means the output is invalid anyway.
    decoded_response = [line.decode('ascii').rstrip('\r\n')
                        for line in response]
    return decoded_response

  def connect(self):
    self._send_command('xmem') # ignore output this time
    self._fetch_device_information()

  def disconnect(self):
    return

  def _fetch_device_information(self):
    data = self._send_command('colq')

    for line in data:
      parsed_line = line.split('\t')

      if parsed_line[0] == 'S/N:':
        self.device_serialno_ = parsed_line[1]
      elif parsed_line[0] == 'Ver:':
        self.device_version_ = parsed_line[1]
        if parsed_line[2] == 'MMOL':
          self.device_glucose_unit_ = common.UNIT_MMOLL
        else:  # I only have a mmol/l device, so I can't be sure.
          self.device_glucose_unit_ = common.UNIT_MGDL
      # There are more entries: Clock, Market, ROM and Usage, but we don't care
      # for those here.
      elif parsed_line[0] == 'CMD OK':
        return

    # I have not figured out why this happens, but sometimes it's echoing back
    # the commands and not replying to them.
    raise exceptions.ConnectionFailed()

  def get_meter_info(self):
    """Fetch and parses the device information.

    Returns:
      A common.MeterInfo object.
    """
    return common.MeterInfo(
      'Freestyle Optium glucometer',
      serial_number=self.get_serial_number(),
      version_info=(
        'Software version: ' + self.get_version(),),
      native_unit=self.get_glucose_unit())

  def get_version(self):
    """Returns an identifier of the firmware version of the glucometer.

    Returns:
      The software version returned by the glucometer, such as "0.22"
    """
    return self.device_version_

  def get_serial_number(self):
    """Retrieve the serial number of the device.

    Returns:
      A string representing the serial number of the device.
    """
    return self.device_serialno_

  def get_glucose_unit(self):
    """Returns a constant representing the unit displayed by the meter.

    Returns:
      common.UNIT_MGDL: if the glucometer displays in mg/dL
      common.UNIT_MMOLL: if the glucometer displays in mmol/L
    """
    return self.device_glucose_unit_

  def get_datetime(self):
    """Returns the current date and time for the glucometer.

    Returns:
      A datetime object built according to the returned response.
    """
    data = self._send_command('colq')

    for line in data:
      if not line.startswith('Clock:'):
        continue

      return _parse_clock(line)

    raise exceptions.InvalidResponse('\n'.join(data))

  def set_datetime(self, date=datetime.datetime.now()):
    """Sets the date and time of the glucometer.

    Args:
      date: The value to set the date/time of the glucometer to. If none is
        given, the current date and time of the computer is used.

    Returns:
      A datetime object built according to the returned response.
    """
    data = self._send_command(date.strftime('tim,%m,%d,%y,%H,%M'))

    parsed_data = ''.join(data)
    if parsed_data != 'CMD OK':
      raise exceptions.InvalidResponse(parsed_data)

    return self.get_datetime()

  def zero_log(self):
    """Zeros out the data log of the device.

    This function will clear the memory of the device deleting all the readings
    in an irrecoverable way.
    """
    raise NotImplementedError

  def get_readings(self):
    """Iterates over the reading values stored in the glucometer.

    Args:
      unit: The glucose unit to use for the output.

    Yields:
      A tuple (date, value) of the readings in the glucometer. The value is a
      floating point in the unit specified; if no unit is specified, the default
      unit in the glucometer will be used.

    Raises:
      exceptions.InvalidResponse: if the response does not match what expected.
    """
    data = self._send_command('xmem')

    # The first line is empty, the second is the serial number, the third the
    # version, the fourth the current time, and the fifth the record count.. The
    # last line has a checksum and the end.
    count = int(data[4])
    if count != (len(data) - 6):
      raise exceptions.InvalidResponse('\n'.join(data))

    # Extract the checksum from the last line.
    checksum_match = _CHECKSUM_RE.match(data[-1])
    if not checksum_match:
      raise exceptions.InvalidResponse('\n'.join(data))

    expected_checksum = int(checksum_match.group('checksum'), 16)
    # exclude the last line in the checksum calculation, as that's the checksum
    # itself. The final \r\n is added separately.
    calculated_checksum = sum(ord(c) for c in '\r\n'.join(data[:-1])) + 0xd + 0xa

    if expected_checksum != calculated_checksum:
      raise exceptions.InvalidChecksum(expected_checksum, calculated_checksum)

    for line in data[5:-1]:
      match = _READING_RE.match(line)
      if not match:
        raise exceptions.InvalidResponse(line)

      if match.group('type') != 'G':
        print('Non-glucose readings are not supported, ignoring.',
              file=sys.stderr)
        continue

      if match.group('reading') == 'HI ':
        value = float("inf")
      else:
        value = float(match.group('reading'))

      day = int(match.group('day'))
      month = _MONTH_MATCHES[match.group('month')]
      year = int(match.group('year'))

      hour, minute = map(int, match.group('time').split(':'))

      timestamp = datetime.datetime(year, month, day, hour, minute)

      # The reading, if present, is always in mg/dL even if the glucometer is
      # set to mmol/L.
      yield common.Reading(timestamp, value)